Publications
How modelling can help steer the course set by the World Health Organization 2021-2030 roadmap on neglected tropical diseases
Gates Open Research, 2021; : . 10.12688/gatesopenres.13327.1
Evaluation of the extended efficacy of the Dengvaxia vaccine against symptomatic and subclinical dengue infection
Nature Medicine, 2021; : . 10.1038/s41591-021-01392-9
Assessing the feasibility of Nipah vaccine efficacy trials based on previous outbreaks in Bangladesh
Vaccine, 2021; : . 10.1016/j.vaccine.2021.08.027
SARS-CoV-2 genomics as a springboard for future disease mitigation in LMICs
Nature Reviews Microbiology, 2021; : . 10.1038/s41579-021-00664-y
Seroprevalence of anti-SARS-CoV-2 IgG at the first epidemic peak in French Guiana, July 2020
PLOS Neglected Tropical Diseases, 2021; : . https://doi.org/10.1371/journal.pntd.0009945
Antigenic evolution of dengue viruses over 20 years
Science, 2021; : . https://doi.org/10.1126/science.abk0058
Arthralgia resolution rate following chikungunya virus infection.
Int J Infect Dis, 2021; 112: 1-7. 10.1016/j.ijid.2021.08.066
Effect of change in vaccine schedule on pertussis epidemiology in France: a modelling and serological study
The Lancet Infectious Diseases, 2021; : . https://doi.org/10.1016/S1473-3099(21)00267-X
Lockdown as a last resort option in case of COVID-19 epidemic rebound: a modelling study
Euro Surveillance, 2021; 26 (22): pii=200153. https://doi.org/10.2807/1560-7917.ES.2021.26.22.2001536
Monitoring the proportion of the population infected by SARS-CoV-2 using age-stratified hospitalisation and serological data: a modelling study
The Lancet Public Health, 2021; 6 (6): e408-e415. https://doi.org/10.1016/S2468-2667(21)00064-5
Ongoing diphtheria outbreak in Yemen: a cross-sectional and genomic epidemiology study
The Lancet Microbe, 2021; : . https://doi.org/10.1016/S2666-5247(21)00094-X
Psoriasis characteristics for the early detection of psoriatic arthritis
The Journal of Rheumatology, 2021; 48 (5): . https://doi.org/10.3899/jrheum.201123
Multiscale mobility explains differential associations between the gross domestic product and COVID-19 transmission in Chinese cities
Journal of Travel Medicine, 2021; 28 (2): . https://doi.org/10.1093/jtm/taaa236
Risk for International Importations of Variant SARS-CoV-2 Originating in the United Kingdom
Emerging Infectious Diseases, 2021; 27(5): 1527–1529. https://dx.doi.org/10.3201%2Feid2705.210050
Reconstructing unseen transmission events to infer dengue dynamics from viral sequences
Nature Communications, 2021; 12: 1810. https://doi.org/10.1038/s41467-021-21888-9
Modelling distributions of Aedes aegypti and Aedes albopictus using climate, host density and interspecies competition
PLOS Neglected Tropical Diseases, 2021; 15(3): e0009063. https://doi.org/10.1371/journal.pntd.0009063
Evolution of outcomes for patients hospitalised during the first 9 months of the SARS-CoV-2 pandemic in France: A retrospective national surveillance data analysis
The Lancet Regional Health - Europe, 2021; 5: 100087. https://doi.org/10.1016/j.lanepe.2021.100087
SARS-CoV-2 transmission across age groups in France and implications for control
Nature Communications, 2021; : . 10.1038/s41467-021-27163-1
Evaluating the impact of curfews and other measures on SARS-CoV-2 transmission in French Guiana
Nature Communications, 2021; 12: 1634 . https://doi.org/10.1038/s41467-021-21944-4
Comparing the age and sex trajectories of SARS-CoV-2 morbidity with other respiratory pathogens points to potential immune mechanisms
MedRxiv, 2021; : . https://doi.org/10.1101/2021.01.07.21249381
The Ecology of Nipah Virus in Bangladesh: A Nexus of Land-Use Change and Opportunistic Feeding Behavior in Bats
Viruses, 2021; 13: . https://doi.org/10.3390/v13020169
Considerations in assessing germline variant pathogenicity using cosegregation analysis
Genetics in Medicine, 2020; 22: 2052–2059. https://doi.org/10.1038/s41436-020-0920-4
Optimization of identifiability for efficient community detection
New Journal of Physics, 2020; 22: 063035. https://doi.org/10.1088/1367-2630/ab8e5e
Reconstruction of Transmission Pairs for Novel Coronavirus Disease 2019 (COVID-19) in Mainland China: Estimation of Superspreading Events, Serial Interval, and Hazard of Infection
Clinical Infectious Diseases, 2020; 71 (12): 3163–3167. https://doi.org/10.1093/cid/ciaa790
Serial interval of SARS-CoV-2 was shortened over time by nonpharmaceutical interventions
Science, 2020; 369 (6507): 1106-1109. 10.1126/science.abc9004
Effects of Proactive Social Distancing on COVID-19 Outbreaks in 58 Cities, China
Emerging Infectious Diseases, 2020; 26 (9): 2267-2269. https://dx.doi.org/10.3201%2Feid2609.201932
Seroprevalence of anti-SARS-CoV-2 IgG at the epidemic peak in French Guiana
MedRxiv, 2020; : . https://doi.org/10.1101/2020.09.27.20202465
Lockdown impact on age-specific contact patterns and behaviours in France
MedRxiv, 2020; : . https://doi.org/10.1101/2020.10.07.20205104
Early chains of transmission of COVID-19 in France
MedRxiv, 2020; : . https://doi.org/10.1101/2020.11.17.20232264
A systematic review of antibody mediated immunity to coronaviruses: kinetics, correlates of protection, and association with severity
Nature Communications, 2020; 11: 4704. 10.1038/s41467-020-18450-4
Seroepidemiologic Study Designs for Determining SARS-COV-2 Transmission and Immunity
Emerging Infectious Diseases, 2020; 26(9): 1978-1986. 10.3201/eid2609.201840
Age-specific mortality and immunity patterns of SARS-CoV-2 infection in 45 countries
Nature, 2020; : . https://doi.org/10.1038/s41586-020-2918-0
Quantifying the localized relationship between vector containment activities and dengue incidence in a real-world setting: A spatial and time series modelling analysis based on geo-located data from Pakistan
PLoS Neglected Tropical Diseases, 2020; 14(5): e0008273. 10.1371/journal.pntd.0008273
Pre-existing chikungunya virus neutralizing antibodies correlate with risk of symptomatic infection and subclinical seroconversion in a Philippine cohort
International Journal of Infectious Diseases, 2020; 95: 167-173. 10.1016/j.ijid.2020.03.073
A Framework to Monitor Changes in Transmission and Epidemiology of Emerging Pathogens: Lessons From Nipah Virus
Journal of Infectious Diseases, 2020; 221(Supplement_4): S363-S369. 10.1093/infdis/jiaa074
Comparing insights from clinic-based versus community-based outbreak investigations: a case study of chikungunya in Bangladesh
International Journal of Infectious Diseases, 2020; 97: 306-312. 10.1016/j.ijid.2020.05.111
Reconstructing Mayaro virus circulation in French Guiana shows frequent spillovers
Nature Communications, 2020; 11: 2842. 10.1038/s41467-020-16516-x
Estimating the burden of SARS-CoV-2 in France.
Science, 2020; 369: 208-211. 10.1126/science.abc3517
Long-term persistence of monotypic dengue transmission in small size isolated populations, French Polynesia, 1978-2014.
PLoS Neglected Tropical Diseases, 2020; 14: e0008110. 10.1371/journal.pntd.0008110
Changing contact patterns over disease progression: Nipah virus as a case study.
Journal of Infectious Diseases, 2020; 222(3): 438-442. 10.1093/infdis/jiaa091
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