Publications
Differential mobility and local variation in infection attack rate
PLoS Computational Biology, 2019; 15(1): e1006600. 10.1371/journal.pcbi.1006600
The IDSpatialStats R Package: Quantifying Spatial Dependence of Infectious Disease Spread
The R Journal, 2019; 11/2: 308-327.
Observational study into the long-term circulation of Zika in Thailand
Lancet Infectious Diseases, 2019; 19(4): 439-446. 10.1016/S1473-3099(18)30718-7
Assessing Zika virus transmission within households during an outbreak in Martinique, 2015-2016
American Journal of Epidemiology, 2019; 188(7): 1389-1396. 10.1093/aje/kwz091
Transmission of Nipah virus: 14 years of investigations in Bangladesh
New England Journal of Medicine, 2019; 380(19): 1804-1814. 10.1056/NEJMoa1805376
Using Healthcare Seeking Behaviors to Estimate the Number of Nipah Outbreaks Missed by Hospital-Based Surveillance in Bangladesh
Internation Journal of Epidemiology, 2019; 48(4): 1219-1227. 10.1093/ije/dyz057
Spatio-temporal dynamics of dengue in Brazil: seasonal travelling waves and determinants of regional synchrony
PLoS Neglected Tropical Diseases, 2019; 13(4): e0007012. 10.1371/journal.pntd.0007012
Air pollution dispersion from biomass stoves to neighboring homes in Mirpur, Dhaka, Bangladesh
BMC Public Health, 2019; 19(1): 425. 10.1186/s12889-019-6751-z
Opportunities for improved surveillance and control of dengue from age-specific case data
eLife, 2019; 8: e45474. 10.7554/eLife.45474
Nationally-representative serostudy of dengue in Bangladesh allows generalizable disease burden estimates
eLife, 2019; 8: e42869. 10.7554/eLife.42869
Impact of Zika virus emergence in French Guiana: A large general population seroprevalence survey
Journal of Infectious Diseases , 2019; 220(12): 1915-1925. 10.1093/infdis/jiz396
Dengue pre-vaccination screening and positive predictive values
Lancet Infectious Diseases , 2019; 19(2): 132-134. 10.1016/S1473-3099(18)30799-0
Dengue serosurvey after a 2-month long outbreak in Nîmes, France, 2015: was there more than met the eye?
Eurosurveillance, 2018; 23: 23. 10.2807/1560-7917.ES.2018.23.23.1700482
Characterization of the spatial and temporal distribution of Nipah virus spillover events in Bangladesh 2007 – 2013
Journal of Infectious Diseases, 2018; 217(9): 1390-1394. 10.1093/infdis/jiy015
Micro-hotspots of Risk in Urban Cholera Epidemics
Journal of Infectious Diseases, 2018; 218(7): 1164-1168. 10.1093/infdis/jiy283
Using serological studies to reconstruct the history of bluetongue epidemic in French cattle under successive vaccination campaigns
Epidemics, 2018; 25: 54-60. 10.1016/j.epidem.2018.05.005
Viridot: An automated virus plaque (immunofocus) counter for the measurement of serological neutralizing responses with application to dengue virus
PLoS Neglected Tropical Diseases, 2018; 12(10): e0006862. 10.1371/journal.pntd.0006862
Reconstruction of antibody dynamics and infection histories to evaluate dengue risk
Nature, 2018; 557(7707): 719-723. 10.1038/s41586-018-0157-4
Understanding dengue virus evolution to support epidemic surveillance and counter-measure development
Infection, Genetics and Evolution, 2018; 62: 279-295. 10.1016/j.meegid.2018.04.032
Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015-16: a modelling study
The Lancet Infectious Diseases, 2017; 17(3): P330-338,. 10.1016/S1473-3099(16)30513-8
Real-time assessment of healthcare requirements during the Zika virus epidemic in Martinique
American Journal of Epidemiology, 2017; 186(10): 1194-1203. 10.1093/aje/kwx008
Evaluating hospital-based surveillance for outbreak detection: a healthcare utilization study from Bangladesh
PLoS Medicine, 2017; 14(1): e1002218. 10.1371/journal.pmed.1002218
Convergence of Humans, Bats, Trees, and Culture in Nipah Virus Transmission, Bangladesh
Emerging Infectious Diseases, 2017; 23(9): 1446-1453. 10.3201/eid2309.161922
Dengue diversity across spatial and temporal scales: local structure and the impact of host population size
Science, 2017; 355(6331): 1302-1306. 10.1126/science.aaj9384
Genomic history of the seventh pandemic of cholera in Africa
Science, 2017; 358(3634): 785-789. 10.1126/science.aad5901
Contact structure, geography and human behavior: the importance of social forces to infectious disease dynamics
Philosophical Transactions of the Royal Society B, 2017; 372: 1719. 10.1098/rstb.2016.0454
Reply to Shanks and Brundage: Many plausible mechanisms of pandemic mortality disparities
Proceedings of the National Academy of Sciences of the United States of America, 2017; 114(18): E3588-E358. 10.1073/pnas.1703851114
Synchrony of Dengue Incidence in Ho Chi Minh City and Bangkok
PLoS Neglected Tropical Diseases, 2016; 10(12): e0005188. 10.1371/journal.pntd.0005188
Seroepidemiology of Human Enterovirus 71 Infection among Children, Cambodia
Emerging Infectious Diseases, 2016; 22(1): 92-5. 10.3201/eid2201.151323
Reconstruction of 60 Years of Chikungunya Epidemiology in the Philippines Demonstrates Episodic and Focal Transmission
Journal of Infectious Diseases, 2016; 213(4): 604-10. 10.1093/infdis/jiv470
Estimating the Severity and Subclinical Burden of Middle East Respiratory Syndrome Coronavirus Infection in the Kingdom of Saudi Arabia
American Journal of Epidemiology, 2016; 183(7): 657-63. 10.1093/aje/kwv452
Dengue Vaccine in Regions of Endemic Disease
The New England Journal of Medicine, 2016; 374(14): 1388. 10.1056/NEJMc1514451
Dengue Virus (DENV) Neutralizing Antibody Kinetics in Children After Symptomatic Primary and Postprimary DENV Infection
Journal of Infectious Dissease, 2016; 213(9): 1428-35. 10.1093/infdis/jiv759
Challenges in Real-Time Prediction of Infectious Disease: A Case Study of Dengue in Thailand
PLoS Neglected Tropical Diseases, 2016; 10(6): e0004761. 10.1371/journal.pntd.0004761
Seasonal Distribution and Climatic Correlates of Dengue Disease in Dhaka, Bangladesh
The American Journal of Tropical Medicine and Hygiene, 2016; 94(6): 1359-61. 10.4269/ajtmh.15-0846
Measuring Spatial Dependence for Infectious Disease Epidemiology
PLoS ONE, 2016; 11(5): e0155249. 10.1371/journal.pone.0155249
Unraveling the drivers of MERS-CoV transmission
Proceedings of the National Academy of Sciences of the United States of America, 2016; 113(32): 9081-6. 10.1073/pnas.1519235113
Association between Zika virus and microcephaly in French Polynesia, 2013-15: a retrospective study
The Lancet, 2016; 387(10033): 2125-2132. 10.1016/S0140-6736(16)00651-6
Estimating infectious disease transmission distances using the overall distribution of cases
Epidemics, 2016; 17: 10-18. 10.1016/j.epidem.2016.10.001
How social structures, space, and behaviors shape the spread of infectious diseases using chikungunya as a case study
Proceedings of the National Academy of Sciences of the United States of America, 2016; 113(47): 13420-1342. 10.1073/pnas.1611391113
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